Syllabus Search Result

14717 items found.

  • SEMINAR B (1)

    Faculty/Graduate School
    POLICY MANAGEMENT / ENVIRONMENT AND INFORMATION STUDIES
    Course Registration Number
    50110
    Subject Sort
    A1102
    Field
    Research Seminars
    Unit
    2 Unit
    K-Number
    FPE-CO-05003-311-43
    Year/Semester
    2022 Spring
    Lecturer Name
    Akiyoshi Hirayama 
    Class Format
    Face-to-face
    Class Style
    *Please click here for more information on the correspondence between 'Class Style' and ’Active Learning Methods’.
    Seminar, Lab / On-site Training / Skill-Development, Group Work, Connecting to Other Sites
    Day of Week・Period
    Fri 5th
    Language
    Japanese
    Research Seminar Theme

    In vivo metabolite profiling

    “Advanced Biosciences” seminars (Tomita, Naito, Kuroda, Kanai, Soga, Arakawa, Suzuki, Hirayama and Tsujimoto) are operated along with “Systems Biology Project” for graduate students. All members, including faculty members, graduate students, and undergraduate students are involved to research projects.
    At the first semester when you join the "Advanced Biosciences"
    seminars (Kenkyukai), you should take "SEMINAR B (1) Masaru Tomita."
    Please check our website for more details. http://www.iab.keio.ac.jp/en/
    Research topics; We will improve the sensitivity of metabolome analysis technology such as capillary electrophoresis-mass spectrometry (CE-MS). By applying this to biological samples, we will elucidate the pathogenic mechanism and search for biomarkers in various diseases.

  • SEMINAR B (1)

    Faculty/Graduate School
    POLICY MANAGEMENT / ENVIRONMENT AND INFORMATION STUDIES
    Course Registration Number
    44668
    Subject Sort
    A1102
    Field
    Research Seminars
    Unit
    2 Unit
    K-Number
    FPE-CO-05003-311-43
    Year/Semester
    2024 Fall
    Lecturer Name
    Aqil Cheddadi 
    Class Format
    Face-to-face
    Class Style
    *Please click here for more information on the correspondence between 'Class Style' and ’Active Learning Methods’.
    Lecture, Seminar, Group Work
    Day of Week・Period
    Wed 4th
    Language
    Japanese
    Research Seminar Theme

    Critical Urban Studies

    In this seminar, participants will learn about the evolution of urban space and current practices. We will examine the most important dimensions that influence the development of towns and cities today and how factors such as transportation, politics, and culture are reflected in the spatial and temporal organization of the urban environment. Through case studies of urban space and architecture, the course will also focus on analysing residential spatial space by studying the interrelationships between the users of space and the designed space.
    Using discussions and presentations, students are encouraged to analyse their spatial experience by applying theoretical concepts.

  • SEMINAR B (1)

    Faculty/Graduate School
    POLICY MANAGEMENT / ENVIRONMENT AND INFORMATION STUDIES
    Course Registration Number
    44141
    Subject Sort
    A1102
    Field
    Research Seminars
    Unit
    2 Unit
    K-Number
    FPE-CO-05003-311-43
    Year/Semester
    2024 Fall
    Lecturer Name
    Masahiro Sugimoto 
    Class Format
    Face-to-face
    Class Style
    *Please click here for more information on the correspondence between 'Class Style' and ’Active Learning Methods’.
    Lab / On-site Training / Skill-Development, Group Work
    Day of Week・Period
    Fri 5th
    Language
    Japanese
    Research Seminar Theme

    Medical data science

    “Advanced Biosciences” seminars

    (Arakawa, Kanai, Kuroda, Kono, Sugimoto, Suzuki, Soga, Naito and Hirayama)are operated along with Academic Project “Advanced Biosciences” for graduate students.

    All members, including faculty members, graduate students, and undergraduate students are involved to research projects.

    The seminar(s) to be taken will be announced when students are notified of their permission to enroll."

    Please check our website for more details.

    https://www.iab.keio.ac.jp/en/index.html

  • SEMINAR B (1)

    Faculty/Graduate School
    POLICY MANAGEMENT / ENVIRONMENT AND INFORMATION STUDIES
    Course Registration Number
    28233
    Subject Sort
    A1102
    Field
    Research Seminars
    Unit
    2 Unit
    K-Number
    FPE-CO-05003-311-43
    Year/Semester
    2024 Spring
    Lecturer Name
    Haruo Suzuki 
    Class Format
    Face-to-face
    Class Style
    *Please click here for more information on the correspondence between 'Class Style' and ’Active Learning Methods’.
    Lab / On-site Training / Skill-Development, Group Work
    Day of Week・Period
    Fri 5th
    Language
    Japanese
    Research Seminar Theme

    Microbial Genomics; Environmental Bioinformatics

    “Advanced Biosciences” seminars (Arakawa, Kanai, Kuroda, Kono, Sugimoto, Suzuki, Soga, Naito and Hirayama) are operated along with Academic Project “Advanced Biosciences” for graduate students.
    All members, including faculty members, graduate students, and undergraduate students are involved to research projects.
    The seminar(s) to be taken will be announced when students are notified of their permission to enroll."
    Please check our website for more details. https://www.iab.keio.ac.jp/en/index.html

    Microorganisms (such as bacteria and viruses) play crucial roles in various environments, including the human body, buildings, sewage, air, soil, and plants. However, some microorganisms act as causes of infectious diseases, posing a threat to human health. In this study, our goal is to understand the evolution and diversity of microorganisms using bioinformatics and genome sequence analysis techniques, with the aim of applying this knowledge effectively across diverse fields, including medicine, agriculture, and engineering.

    The increase in microbial infections can be attributed to factors such as antimicrobial resistance (AMR) in pathogens, as well as social factors like urbanization and human mobility. If no measures are taken, it is predicted that by 2050, infections caused by antimicrobial resistance (AMR) pathogens could result in 10 million deaths worldwide annually, so-called a 'hidden pandemic.' To prepare for the next pandemic, it is crucial to monitor the status of urban microbiomes and share data.

    We have been collecting microbiome data in various cities and periods (e.g., before, during, and after the Olympics and Paralympics). We submit this data to public databases that can be accessed by anyone without restrictions. These datasets are expected to be effectively utilized in understanding the diversity and dynamics of microorganisms.

    The findings of this research are expected to contribute to various fields, including biodiversity, public health, forensic science, architecture, and urban planning.

  • SEMINAR B (1)

    Faculty/Graduate School
    POLICY MANAGEMENT / ENVIRONMENT AND INFORMATION STUDIES
    Course Registration Number
    47413
    Subject Sort
    A1102
    Field
    Research Seminars
    Unit
    2 Unit
    K-Number
    FPE-CO-05003-311-43
    Year/Semester
    2023 Fall
    Lecturer Name
    Nobuaki Kono 
    Class Format
    Face-to-face
    Class Style
    *Please click here for more information on the correspondence between 'Class Style' and ’Active Learning Methods’.
    Lab / On-site Training / Skill-Development, Group Work, Connecting to Other Sites
    Day of Week・Period
    Fri 5th
    Language
    Japanese
    Research Seminar Theme

    Synthetic biology

    “Advanced Biosciences” seminars (Arakawa, Kanai, Kuroda, Kono, Sugimoto, Suzuki, Soga, Tsujimoto, Naito and Hirayama) are operated along with Academic Project “Advanced Biosciences” for graduate students.
    All members, including faculty members, graduate students, and undergraduate students are involved to research projects.
    The seminar(s) to be taken will be announced when students are notified of their permission to enroll."
    Please check our website for more details. https://www.iab.keio.ac.jp/en/index.html

    This Synthetic Biology Project aims to understand the design of living organisms constitutively, and is not restricted to any particular organism, but rather conducts research on a phenomenon-based basis. For this reason, we study not only major model organisms such as bacteria and rats, but also organisms that have not been studied very much in the past, such as slime molds, ants, and spiders. We welcome proposals for new target organisms with interesting phenomena.

    Our research approach combines both experimental and computational (wet and dry) methods. Specifically, we combine experimental processing such as field sampling, culturing, nucleic acid extraction, and genome engineering with informatics processing such as a simulation, genome analysis, sequence analysis, and image analysis.

    Keywords: synthetic biology, genome biology, behavioral ecology, molecular biology, molecular ecology, systems biology, bioinformatics

  • SEMINAR B (1)

    Faculty/Graduate School
    POLICY MANAGEMENT / ENVIRONMENT AND INFORMATION STUDIES
    Course Registration Number
    47394
    Subject Sort
    A1102
    Field
    Research Seminars
    Unit
    2 Unit
    K-Number
    FPE-CO-05003-311-43
    Year/Semester
    2023 Fall
    Lecturer Name
    Masahiro Sugimoto 
    Class Format
    Face-to-face
    Class Style
    *Please click here for more information on the correspondence between 'Class Style' and ’Active Learning Methods’.
    Lab / On-site Training / Skill-Development, Group Work, Connecting to Other Sites
    Day of Week・Period
    Fri 5th
    Language
    Japanese
    Research Seminar Theme

    Medical data science

    “Advanced Biosciences” seminars (Arakawa, Kanai, Kuroda, Kono, Sugimoto, Suzuki, Soga, Tsujimoto, Naito and Hirayama) are operated along with Academic Project “Advanced Biosciences” for graduate students.
    All members, including faculty members, graduate students, and undergraduate students are involved to research projects.
    The seminar(s) to be taken will be announced when students are notified of their permission to enroll."
    Please check our website for more details. https://www.iab.keio.ac.jp/en/index.html

  • SEMINAR B (1)

    Faculty/Graduate School
    POLICY MANAGEMENT / ENVIRONMENT AND INFORMATION STUDIES
    Course Registration Number
    47380
    Subject Sort
    A1102
    Field
    Research Seminars
    Unit
    2 Unit
    K-Number
    FPE-CO-05003-311-43
    Year/Semester
    2023 Spring
    Lecturer Name
    Masahiro Sugimoto 
    Class Format
    Face-to-face
    Class Style
    *Please click here for more information on the correspondence between 'Class Style' and ’Active Learning Methods’.
    Lab / On-site Training / Skill-Development, Group Work, Connecting to Other Sites
    Day of Week・Period
    Thu 5th
    Language
    Japanese
    Research Seminar Theme

    Medical data science

    “Advanced Biosciences” seminars (Arakawa, Hirayama, Kanai, Kono, Kuroda, Naito, Soga, Sugimoto, Suzuki, and Tsujimoto are operated along with Academic Project “Advanced Biosciences” for graduate students. All members, including faculty members, graduate students, and undergraduate students are involved to research projects.

    The seminar(s) to be taken will be announced when students are notified of their permission to enroll."

    Please check our website for more details. https://www.iab.keio.ac.jp/en/index.html

    - Contents
    We will study data analyses in medical fields, including various data, such as omics and public datasets. We would produce new scientific findings using new information technologies, such as artificial intelligence and mathematical simulation.

  • SEMINAR B (2)

    Faculty/Graduate School
    POLICY MANAGEMENT / ENVIRONMENT AND INFORMATION STUDIES
    Course Registration Number
    30230
    Subject Sort
    A1102
    Field
    Research Seminars
    Unit
    2 Unit
    K-Number
    FPE-CO-05003-311-43
    Year/Semester
    2023 Fall
    Lecturer Name
    Haruo Suzuki 
    Class Format
    Face-to-face
    Class Style
    *Please click here for more information on the correspondence between 'Class Style' and ’Active Learning Methods’.
    Lab / On-site Training / Skill-Development, Group Work, Connecting to Other Sites
    Day of Week・Period
    Tue 5th
    Language
    Japanese
    Research Seminar Theme

    Microbial Genomics; Environmental Bioinformatics

    “Advanced Biosciences” seminars (Arakawa, Kanai, Kuroda, Kono, Sugimoto, Suzuki, Soga, Tsujimoto, Naito and Hirayama) are operated along with Academic Project “Advanced Biosciences” for graduate students.
    All members, including faculty members, graduate students, and undergraduate students are involved to research projects.
    The seminar(s) to be taken will be announced when students are notified of their permission to enroll."
    Please check our website for more details. https://www.iab.keio.ac.jp/en/index.html

    Microorganisms play important roles in various environments, including the human body, buildings, sewage, air, soil, and plants. However, they also pose a threat to human health as they can cause various infectious diseases. In this study, our aim is to understand the evolution and diversity of microorganisms using bioinformatics and genome sequence analysis techniques. We seek to effectively apply this knowledge in the fields of medicine, agriculture, engineering, and other disciplines.

    The increase in microbial infections can be attributed to factors such as antimicrobial resistance (AMR) in pathogens, as well as social factors like urbanization and human mobility.

    If no measures are taken, it is predicted that by 2050, infections caused by AMR pathogens could result in 10 million deaths worldwide annually. Mobile genetic elements (MGEs), such as plasmids and viruses, contribute to the spread of AMR and virulence through horizontal gene transfer among organisms. Our research focuses on the evolution and diversity of MGEs in various environments.

    To design cities and built environments in a way that considers human health, it is necessary to collect and share data on environmental microbiomes. We have been collecting microbiome data in public spaces such as mass-transit systems and schools. Additionally, we gather data on urban microbiomes during the COVID-19 pandemic and around mass gathering events such as the World Cup, Olympics, and Paralympics. We submit this data into public databases that can be accessed by anyone without restrictions. These datasets are expected to be effectively utilized in understanding the diversity and dynamics of microorganisms.

    The findings of this research are expected to contribute to various fields, including biodiversity, public health, forensic science, architecture, and urban planning.

  • SEMINAR B (1)

    Faculty/Graduate School
    POLICY MANAGEMENT / ENVIRONMENT AND INFORMATION STUDIES
    Course Registration Number
    30780
    Subject Sort
    A1102
    Field
    Research Seminars
    Unit
    2 Unit
    K-Number
    FPE-CO-05003-311-43
    Year/Semester
    2023 Fall
    Lecturer Name
    Haruo Suzuki 
    Class Format
    Face-to-face
    Class Style
    *Please click here for more information on the correspondence between 'Class Style' and ’Active Learning Methods’.
    Lab / On-site Training / Skill-Development, Group Work, Connecting to Other Sites
    Day of Week・Period
    Fri 5th
    Language
    Japanese
    Research Seminar Theme

    Microbial Genomics; Environmental Bioinformatics

    “Advanced Biosciences” seminars (Arakawa, Kanai, Kuroda, Kono, Sugimoto, Suzuki, Soga, Tsujimoto, Naito and Hirayama) are operated along with Academic Project “Advanced Biosciences” for graduate students.
    All members, including faculty members, graduate students, and undergraduate students are involved to research projects.
    The seminar(s) to be taken will be announced when students are notified of their permission to enroll."
    Please check our website for more details. https://www.iab.keio.ac.jp/en/index.html

    Microorganisms play important roles in various environments, including the human body, buildings, sewage, air, soil, and plants. However, they also pose a threat to human health as they can cause various infectious diseases. In this study, our aim is to understand the evolution and diversity of microorganisms using bioinformatics and genome sequence analysis techniques. We seek to effectively apply this knowledge in the fields of medicine, agriculture, engineering, and other disciplines.

    The increase in microbial infections can be attributed to factors such as antimicrobial resistance (AMR) in pathogens, as well as social factors like urbanization and human mobility.

    If no measures are taken, it is predicted that by 2050, infections caused by AMR pathogens could result in 10 million deaths worldwide annually. Mobile genetic elements (MGEs), such as plasmids and viruses, contribute to the spread of AMR and virulence through horizontal gene transfer among organisms. Our research focuses on the evolution and diversity of MGEs in various environments.

    To design cities and built environments in a way that considers human health, it is necessary to collect and share data on environmental microbiomes. We have been collecting microbiome data in public spaces such as mass-transit systems and schools. Additionally, we gather data on urban microbiomes during the COVID-19 pandemic and around mass gathering events such as the World Cup, Olympics, and Paralympics. We submit this data into public databases that can be accessed by anyone without restrictions. These datasets are expected to be effectively utilized in understanding the diversity and dynamics of microorganisms.

    The findings of this research are expected to contribute to various fields, including biodiversity, public health, forensic science, architecture, and urban planning.

  • SEMINAR B (2)

    Faculty/Graduate School
    POLICY MANAGEMENT / ENVIRONMENT AND INFORMATION STUDIES
    Course Registration Number
    30120
    Subject Sort
    A1102
    Field
    Research Seminars
    Unit
    2 Unit
    K-Number
    FPE-CO-05003-311-43
    Year/Semester
    2023 Spring
    Lecturer Name
    Haruo Suzuki 
    Class Format
    Face-to-face
    Class Style
    *Please click here for more information on the correspondence between 'Class Style' and ’Active Learning Methods’.
    Lab / On-site Training / Skill-Development, Group Work, Connecting to Other Sites
    Day of Week・Period
    Tue 5th
    Language
    Japanese
    Research Seminar Theme

    Microbial Genomics; Environmental Bioinformatics

    “Advanced Biosciences” seminars (Arakawa, Hirayama, Kanai, Kono, Kuroda, Naito, Soga, Sugimoto, Suzuki, and Tsujimoto are operated along with Academic Project “Advanced Biosciences” for graduate students. All members, including faculty members, graduate students, and undergraduate students are involved to research projects.
    The seminar(s) to be taken will be announced when students are notified of their permission to enroll."
    Please check our website for more details. https://www.iab.keio.ac.jp/en/index.html


    While microorganisms have important roles in various environments (e.g. human body, buildings, sewage, air, soil and plants), they can cause many infectious diseases, which are threats to public health. In this research group, we use bioinformatics and genomics to understand microbial diversity and its medicinal, agricultural and industrial applications.


    Our research focuses on reproducible bioinformatics, genome microbiology, and urban microbiomes. It has been estimated that, by 2050, 10 million people will die every year due to antimicrobial resistance (AMR) if no action is taken. Plasmids often carry multiple AMR genes and can be horizontally transferred between microbes, contributing to the spread of AMR in microbial communities. To identify and track antimicrobial resistance genes (resistomes) and mobile genetic elements (e.g., viruses, plasmids, and transposable elements) in urban environments, we have been collecting samples in built environments such as mass-transit systems around the globe (International MetaSUB Consortium, 2021, 2022 [https://metasub.org/]) and will sample urban environments around the globe before, during and after the COVID-19 pandemic and the mass gathering such as international sport events including the World Cup and Olympic & Paralympic Games (http://metasub.org/projects/). We are using a combination of bioinformatics tools for creating global maps of microbiomes and resistomes, inferring host range and transmission routes of mobile genetic elements (e.g., viruses and plasmids), and gaining insight into microbial lifestyles (Suzuki et al., 2017; Yano et al., 2018; Merino et al., 2019; Tokuda et al., 2020).

  • SEMINAR B (1)

    Faculty/Graduate School
    POLICY MANAGEMENT / ENVIRONMENT AND INFORMATION STUDIES
    Course Registration Number
    30115
    Subject Sort
    A1102
    Field
    Research Seminars
    Unit
    2 Unit
    K-Number
    FPE-CO-05003-311-43
    Year/Semester
    2023 Spring
    Lecturer Name
    Haruo Suzuki 
    Class Format
    Face-to-face
    Class Style
    *Please click here for more information on the correspondence between 'Class Style' and ’Active Learning Methods’.
    Lab / On-site Training / Skill-Development, Group Work, Connecting to Other Sites
    Day of Week・Period
    Fri 5th
    Language
    Japanese
    Research Seminar Theme

    Microbial Genomics; Environmental Bioinformatics

    “Advanced Biosciences” seminars (Arakawa, Hirayama, Kanai, Kono, Kuroda, Naito, Soga, Sugimoto, Suzuki, and Tsujimoto are operated along with Academic Project “Advanced Biosciences” for graduate students. All members, including faculty members, graduate students, and undergraduate students are involved to research projects.
    The seminar(s) to be taken will be announced when students are notified of their permission to enroll."
    Please check our website for more details. https://www.iab.keio.ac.jp/en/index.html


    While microorganisms have important roles in various environments (e.g. human body, buildings, sewage, air, soil and plants), they can cause many infectious diseases, which are threats to public health. In this research group, we use bioinformatics and genomics to understand microbial diversity and its medicinal, agricultural and industrial applications.


    Our research focuses on reproducible bioinformatics, genome microbiology, and urban microbiomes. It has been estimated that, by 2050, 10 million people will die every year due to antimicrobial resistance (AMR) if no action is taken. Plasmids often carry multiple AMR genes and can be horizontally transferred between microbes, contributing to the spread of AMR in microbial communities. To identify and track antimicrobial resistance genes (resistomes) and mobile genetic elements (e.g., viruses, plasmids, and transposable elements) in urban environments, we have been collecting samples in built environments such as mass-transit systems around the globe (International MetaSUB Consortium, 2021, 2022 [https://metasub.org/]) and will sample urban environments around the globe before, during and after the COVID-19 pandemic and the mass gathering such as international sport events including the World Cup and Olympic & Paralympic Games (http://metasub.org/projects/). We are using a combination of bioinformatics tools for creating global maps of microbiomes and resistomes, inferring host range and transmission routes of mobile genetic elements (e.g., viruses and plasmids), and gaining insight into microbial lifestyles (Suzuki et al., 2017; Yano et al., 2018; Merino et al., 2019; Tokuda et al., 2020).

  • SEMINAR B (1)

    Faculty/Graduate School
    POLICY MANAGEMENT / ENVIRONMENT AND INFORMATION STUDIES
    Course Registration Number
    29369
    Subject Sort
    A1102
    Field
    Research Seminars
    Unit
    2 Unit
    K-Number
    FPE-CO-05003-311-43
    Year/Semester
    2023 Fall
    Lecturer Name
    Kazuharu Arakawa 
    Class Format
    Face-to-face
    Class Style
    *Please click here for more information on the correspondence between 'Class Style' and ’Active Learning Methods’.
    Lab / On-site Training / Skill-Development, Group Work, Connecting to Other Sites
    Day of Week・Period
    Fri 5th
    Language
    Japanese
    Research Seminar Theme

    Genome Biology (Advanced Biosciences)

    “Advanced Biosciences” seminars (Arakawa, Hirayama, Kanai, Kono, Kuroda, Naito, Soga, Sugimoto, Suzuki, and Tsujimoto are operated along with Academic Project “Advanced Biosciences” for graduate students. All members, including faculty members, graduate students, and undergraduate students are involved to research projects.

    The seminar(s) to be taken will be announced when students are notified of their permission to enroll."

    Please check our website for more details. https://www.iab.keio.ac.jp/en/index.html

    Biology is rapidly transforming into a data-driven science. Key to this new paradigm is in the high-throughput, quantitative, and comprehensive measurement of biological phenomenon, and statistics and informatics techniques to extract novel biological insights from the large-scale data.

    In this research group, we synergistically combine experiments, measurements, and informatics to gain quantitative understanding of living systems.

  • SEMINAR B (1)

    Faculty/Graduate School
    POLICY MANAGEMENT / ENVIRONMENT AND INFORMATION STUDIES
    Course Registration Number
    29479
    Subject Sort
    A1102
    Field
    Research Seminars
    Unit
    2 Unit
    K-Number
    FPE-CO-05003-311-43
    Year/Semester
    2023 Spring
    Lecturer Name
    Kazuharu Arakawa 
    Class Format
    Face-to-face
    Class Style
    *Please click here for more information on the correspondence between 'Class Style' and ’Active Learning Methods’.
    Lab / On-site Training / Skill-Development, Group Work, Connecting to Other Sites
    Day of Week・Period
    Fri 5th
    Language
    Japanese
    Research Seminar Theme

    Genome Biology (Advanced Biosciences)

    “Advanced Biosciences” seminars (Arakawa, Hirayama, Kanai, Kono, Kuroda, Naito, Soga, Sugimoto, Suzuki, and Tsujimoto are operated along with Academic Project “Advanced Biosciences” for graduate students. All members, including faculty members, graduate students, and undergraduate students are involved to research projects.

    The seminar(s) to be taken will be announced when students are notified of their permission to enroll."

    Please check our website for more details. https://www.iab.keio.ac.jp/en/index.html

    Biology is rapidly transforming into a data-driven science. Key to this new paradigm is in the high-throughput, quantitative, and comprehensive measurement of biological phenomenon, and statistics and informatics techniques to extract novel biological insights from the large-scale data.

    In this research group, we synergistically combine experiments, measurements, and informatics to gain quantitative understanding of living systems.

  • SEMINAR B (1)

    Faculty/Graduate School
    POLICY MANAGEMENT / ENVIRONMENT AND INFORMATION STUDIES
    Course Registration Number
    05301
    Subject Sort
    A1102
    Field
    Research Seminars
    Unit
    2 Unit
    K-Number
    FPE-CO-05003-311-43
    Year/Semester
    2022 Spring
    Lecturer Name
    Masaru Tomita 
    Class Format
    Face-to-face
    Class Style
    *Please click here for more information on the correspondence between 'Class Style' and ’Active Learning Methods’.
    Seminar, Lab / On-site Training / Skill-Development, Group Work, Connecting to Other Sites
    Day of Week・Period
    Tue 5th
    Language
    Japanese
    Research Seminar Theme

    Introduction to Systems Biology

    “Advanced Biosciences” seminars (Tomita, Naito, Kuroda, Kanai, Soga, Arakawa, Suzuki and Tsujimoto) are operated along with “Systems Biology Project” for graduate students. All members, including faculty members, graduate students, and undergraduate students are involved to research projects.
    At the first semester when you join the "Advanced Biosciences" seminars (Kenkyukai), you should take "SEMINAR B (1) Masaru Tomita."
    Please check our website for more details. http://www.iab.keio.ac.jp/en

  • SEMINAR B (2)

    Faculty/Graduate School
    POLICY MANAGEMENT / ENVIRONMENT AND INFORMATION STUDIES
    Course Registration Number
    31949
    Subject Sort
    A1102
    Field
    Research Seminars
    Unit
    2 Unit
    K-Number
    FPE-CO-05003-311-43
    Year/Semester
    2022 Fall
    Lecturer Name
    Haruo Suzuki 
    Class Format
    Face-to-face
    Class Style
    *Please click here for more information on the correspondence between 'Class Style' and ’Active Learning Methods’.
    Lab / On-site Training / Skill-Development, Group Work, Connecting to Other Sites
    Day of Week・Period
    Fri 5th
    Language
    Japanese
    Research Seminar Theme

    Microbial Genomics; Environmental Bioinformatics

    “Advanced Biosciences” seminars (Tomita, Naito, Kuroda, Kanai, Soga, Arakawa, Suzuki, Tsujimoto and Hirayama) are operated along with “Systems Biology Project” for graduate students. All members, including faculty members, graduate students, and undergraduate students are involved to research projects.
    At the first semester when you join the "Advanced Biosciences" seminars (Kenkyukai), you should take "SEMINAR B (1) Masaru Tomita."
    Please check our website for more details. http://www.iab.keio.ac.jp/en


    While microorganisms have important roles in various environments (e.g. human body, buildings, sewage, air, soil and plants), they can cause many infectious diseases, which are threats to public health. In this research group, we use bioinformatics and genomics to understand microbial diversity and its medicinal, agricultural and industrial applications.


    Our research focuses on reproducible bioinformatics, genome microbiology, and urban microbiomes. It has been estimated that, by 2050, 10 million people will die every year due to antimicrobial resistance (AMR) if no action is taken. Plasmids often carry multiple AMR genes and can be horizontally transferred between microbes, contributing to the spread of AMR in microbial communities. To identify and track antimicrobial resistance genes (resistomes) and mobile genetic elements (e.g., viruses, plasmids, and transposable elements) in urban environments, we have been collecting samples in built environments such as mass-transit systems around the globe (International MetaSUB Consortium, 2021, 2022) and will sample urban environments around the globe before, during and after the COVID-19 pandemic and the mass gathering such as international sport events including the World Cup and Olympic & Paralympic Games (http://metasub.org/projects/). We are using a combination of bioinformatics tools for creating global maps of microbiomes and resistomes, inferring host range and transmission routes of mobile genetic elements (e.g., viruses and plasmids), and gaining insight into microbial lifestyles (Suzuki et al., 2017; Yano et al., 2018; Merino et al., 2019; Tokuda et al., 2020).

  • SEMINAR B (1)

    Faculty/Graduate School
    POLICY MANAGEMENT / ENVIRONMENT AND INFORMATION STUDIES
    Course Registration Number
    32251
    Subject Sort
    A1102
    Field
    Research Seminars
    Unit
    2 Unit
    K-Number
    FPE-CO-05003-311-43
    Year/Semester
    2022 Fall
    Lecturer Name
    Haruo Suzuki 
    Class Format
    Face-to-face
    Class Style
    *Please click here for more information on the correspondence between 'Class Style' and ’Active Learning Methods’.
    Lab / On-site Training / Skill-Development, Group Work, Connecting to Other Sites
    Day of Week・Period
    Tue 5th
    Language
    Japanese
    Research Seminar Theme

    Microbial Genomics; Environmental Bioinformatics

    “Advanced Biosciences” seminars (Tomita, Naito, Kuroda, Kanai, Soga, Arakawa, Suzuki, Tsujimoto and Hirayama) are operated along with “Systems Biology Project” for graduate students. All members, including faculty members, graduate students, and undergraduate students are involved to research projects.
    At the first semester when you join the "Advanced Biosciences" seminars (Kenkyukai), you should take "SEMINAR B (1) Masaru Tomita."
    Please check our website for more details. http://www.iab.keio.ac.jp/en


    While microorganisms have important roles in various environments (e.g. human body, buildings, sewage, air, soil and plants), they can cause many infectious diseases, which are threats to public health. In this research group, we use bioinformatics and genomics to understand microbial diversity and its medicinal, agricultural and industrial applications.


    Our research focuses on reproducible bioinformatics, genome microbiology, and urban microbiomes. It has been estimated that, by 2050, 10 million people will die every year due to antimicrobial resistance (AMR) if no action is taken. Plasmids often carry multiple AMR genes and can be horizontally transferred between microbes, contributing to the spread of AMR in microbial communities. To identify and track antimicrobial resistance genes (resistomes) and mobile genetic elements (e.g., viruses, plasmids, and transposable elements) in urban environments, we have been collecting samples in built environments such as mass-transit systems around the globe (International MetaSUB Consortium, 2021, 2022) and will sample urban environments around the globe before, during and after the COVID-19 pandemic and the mass gathering such as international sport events including the World Cup and Olympic & Paralympic Games (http://metasub.org/projects/). We are using a combination of bioinformatics tools for creating global maps of microbiomes and resistomes, inferring host range and transmission routes of mobile genetic elements (e.g., viruses and plasmids), and gaining insight into microbial lifestyles (Suzuki et al., 2017; Yano et al., 2018; Merino et al., 2019; Tokuda et al., 2020).

  • SEMINAR B (2)

    Faculty/Graduate School
    POLICY MANAGEMENT / ENVIRONMENT AND INFORMATION STUDIES
    Course Registration Number
    31839
    Subject Sort
    A1102
    Field
    Research Seminars
    Unit
    2 Unit
    K-Number
    FPE-CO-05003-311-43
    Year/Semester
    2022 Spring
    Lecturer Name
    Haruo Suzuki 
    Class Format
    Face-to-face
    Class Style
    *Please click here for more information on the correspondence between 'Class Style' and ’Active Learning Methods’.
    Seminar, Lab / On-site Training / Skill-Development, Group Work, Connecting to Other Sites
    Day of Week・Period
    Fri 5th
    Language
    Japanese
    Research Seminar Theme

    Microbial Genomics; Environmental Bioinformatics

    “Advanced Biosciences” seminars (Tomita, Naito, Kuroda, Kanai, Soga, Arakawa, Suzuki and Tsujimoto) are operated along with “Systems Biology Project” for graduate students. All members, including faculty members, graduate students, and undergraduate students are involved to research projects.
    At the first semester when you join the "Advanced Biosciences" seminars (Kenkyukai), you should take "SEMINAR B (1) Masaru Tomita."
    Please check our website for more details. http://www.iab.keio.ac.jp/en


    While microorganisms have important roles in various environments (e.g. human body, soil, air, and built environments), they can cause many infectious diseases, which are threats to public health. In this research group, we use bioinformatics and genomics to understand microbial diversity and its medicinal, agricultural and industrial applications.


    Our research focuses on reproducible bioinformatics, genome microbiology, and urban microbiomes. It has been estimated that, by 2050, 10 million people will die every year due to antimicrobial resistance (AMR) if no action is taken. Plasmids often carry multiple AMR genes and can be horizontally transferred between microbes, contributing to the spread of AMR in microbial communities. To identify and track antimicrobial resistance genes (resistomes) and mobile genetic elements (e.g., viruses, plasmids, and transposable elements) in urban built environments, we have been collecting samples in mass-transit systems around the globe (Danko et al. International MetaSUB Consortium, 2021) and will sample urban environments around the globe before, during and after the COVID-19 pandemic and the mass gathering such as international sport events including the World Cup and Olympic & Paralympic Games (http://metasub.org/projects/). We are using a combination of bioinformatics tools for creating global maps of microbiomes and resistomes, inferring host range and transmission routes of mobile genetic elements (e.g., viruses and plasmids), and gaining insight into microbial lifestyles (Suzuki et al., 2017; Yano et al., 2018; Merino et al., 2019; Tokuda et al., 2020).

  • SEMINAR B (1)

    Faculty/Graduate School
    POLICY MANAGEMENT / ENVIRONMENT AND INFORMATION STUDIES
    Course Registration Number
    31824
    Subject Sort
    A1102
    Field
    Research Seminars
    Unit
    2 Unit
    K-Number
    FPE-CO-05003-311-43
    Year/Semester
    2022 Spring
    Lecturer Name
    Haruo Suzuki 
    Class Format
    Face-to-face
    Class Style
    *Please click here for more information on the correspondence between 'Class Style' and ’Active Learning Methods’.
    Seminar, Lab / On-site Training / Skill-Development, Group Work, Connecting to Other Sites
    Day of Week・Period
    Tue 5th
    Language
    Japanese
    Research Seminar Theme

    Microbial Genomics; Environmental Bioinformatics

    “Advanced Biosciences” seminars (Tomita, Naito, Kuroda, Kanai, Soga, Arakawa, Suzuki and Tsujimoto) are operated along with “Systems Biology Project” for graduate students. All members, including faculty members, graduate students, and undergraduate students are involved to research projects.
    At the first semester when you join the "Advanced Biosciences" seminars (Kenkyukai), you should take "SEMINAR B (1) Masaru Tomita."
    Please check our website for more details. http://www.iab.keio.ac.jp/en


    While microorganisms have important roles in various environments (e.g. human body, soil, air, and built environments), they can cause many infectious diseases, which are threats to public health. In this research group, we use bioinformatics and genomics to understand microbial diversity and its medicinal, agricultural and industrial applications.


    Our research focuses on reproducible bioinformatics, genome microbiology, and urban microbiomes. It has been estimated that, by 2050, 10 million people will die every year due to antimicrobial resistance (AMR) if no action is taken. Plasmids often carry multiple AMR genes and can be horizontally transferred between microbes, contributing to the spread of AMR in microbial communities. To identify and track antimicrobial resistance genes (resistomes) and mobile genetic elements (e.g., viruses, plasmids, and transposable elements) in urban built environments, we have been collecting samples in mass-transit systems around the globe (Danko et al. International MetaSUB Consortium, 2021) and will sample urban environments around the globe before, during and after the COVID-19 pandemic and the mass gathering such as international sport events including the World Cup and Olympic & Paralympic Games (http://metasub.org/projects/). We are using a combination of bioinformatics tools for creating global maps of microbiomes and resistomes, inferring host range and transmission routes of mobile genetic elements (e.g., viruses and plasmids), and gaining insight into microbial lifestyles (Suzuki et al., 2017; Yano et al., 2018; Merino et al., 2019; Tokuda et al., 2020).

  • SEMINAR B (1)

    Faculty/Graduate School
    POLICY MANAGEMENT / ENVIRONMENT AND INFORMATION STUDIES
    Course Registration Number
    30737
    Subject Sort
    A1102
    Field
    Research Seminars
    Unit
    2 Unit
    K-Number
    FPE-CO-05003-311-43
    Year/Semester
    2022 Fall
    Lecturer Name
    Kazuharu Arakawa 
    Class Format
    Face-to-face
    Class Style
    *Please click here for more information on the correspondence between 'Class Style' and ’Active Learning Methods’.
    Lab / On-site Training / Skill-Development, Group Work, Connecting to Other Sites
    Day of Week・Period
    Fri 5th
    Language
    Japanese
    Research Seminar Theme

    Genome Biology (Advanced Biosciences)

    “Advanced Biosciences” seminars (Tomita, Naito, Kuroda, Kanai, Soga, Arakawa, Suzuki, Tsujimoto, and Hirayama) are operated along with “Systems Biology Project” for graduate students. All members, including faculty members, graduate students, and undergraduate students are involved to research projects.
    At the first semester when you join the "Advanced Biosciences" seminars (Kenkyukai), you should take "SEMINAR B (1) Masaru Tomita."
    Please check our website for more details. http://www.iab.keio.ac.jp/en

    Biology is rapidly transforming into a data-driven science. Key to this new paradigm is in the high-throughput, quantitative, and comprehensive measurement of biological phenomenon, and statistics and informatics techniques to extract novel biological insights from the large-scale data.

    In this research group, we synergistically combine experiments, measurements, and informatics to gain quantitative understanding of living systems.

  • SEMINAR B (1)

    Faculty/Graduate School
    POLICY MANAGEMENT / ENVIRONMENT AND INFORMATION STUDIES
    Course Registration Number
    31183
    Subject Sort
    A1102
    Field
    Research Seminars
    Unit
    2 Unit
    K-Number
    FPE-CO-05003-311-43
    Year/Semester
    2022 Spring
    Lecturer Name
    Kazuharu Arakawa 
    Class Format
    Face-to-face
    Class Style
    *Please click here for more information on the correspondence between 'Class Style' and ’Active Learning Methods’.
    Lab / On-site Training / Skill-Development, Group Work, Connecting to Other Sites
    Day of Week・Period
    Fri 5th
    Language
    Japanese
    Research Seminar Theme

    Genome Biology (Advanced Biosciences)

    “Advanced Biosciences” seminars (Tomita, Naito, Kuroda, Kanai, Soga, Arakawa, Suzuki and Tsujimoto) are operated along with “Systems Biology Project” for graduate students. All members, including faculty members, graduate students, and undergraduate students are involved to research projects.
    At the first semester when you join the "Advanced Biosciences" seminars (Kenkyukai), you should take "SEMINAR B (1) Masaru Tomita."
    Please check our website for more details. http://www.iab.keio.ac.jp/en

    Biology is rapidly transforming into a data-driven science. Key to this new paradigm is in the high-throughput, quantitative, and comprehensive measurement of biological phenomenon, and statistics and informatics techniques to extract novel biological insights from the large-scale data.

    In this research group, we synergistically combine experiments, measurements, and informatics to gain quantitative understanding of living systems.

  • SEMINAR B (1)

    Faculty/Graduate School
    POLICY MANAGEMENT / ENVIRONMENT AND INFORMATION STUDIES
    Course Registration Number
    06035
    Subject Sort
    A1102
    Field
    Research Seminars
    Unit
    2 Unit
    K-Number
    FPE-CO-05003-311-43
    Year/Semester
    2022 Fall
    Lecturer Name
    Akio Kanai 
    Class Format
    Face-to-face
    Class Style
    *Please click here for more information on the correspondence between 'Class Style' and ’Active Learning Methods’.
    Group Work, Connecting to Other Sites
    Day of Week・Period
    Fri 5th
    Language
    Japanese
    Research Seminar Theme

    Analysis of functional RNAs and their regulatory proteins

    “Advanced Biosciences” seminars (Tomita, Naito, Kuroda, Kanai, Soga, Arakawa, Suzuki, Tsujimoto and Hirayama) are operated along with “Systems Biology Project” for graduate students. All members, including faculty members, graduate students, and undergraduate students are involved to research projects.
    At the first semester when you join the "Advanced Biosciences" seminars (Kenkyukai), you should take "SEMINAR B (1) Masaru Tomita."
    Please check our website for more details. http://www.iab.keio.ac.jp/en


    Research activities & projects of the RNA group:
    (1) RNA-binding proteins & RNA-related enzymes
    (2) Non-coding RNAs (microRNA & small RNA)
    (3) tRNA & rRNA
    (4) Post-transcriptional RNA processing
    (5) Developmental regulation of gene expression
    (6) Artificial small RNA
    (7) Molecular evolution
    (8) Origin of life

  • SEMINAR B (1)

    Faculty/Graduate School
    POLICY MANAGEMENT / ENVIRONMENT AND INFORMATION STUDIES
    Course Registration Number
    06657
    Subject Sort
    A1102
    Field
    Research Seminars
    Unit
    2 Unit
    K-Number
    FPE-CO-05003-311-43
    Year/Semester
    2022 Spring
    Lecturer Name
    Akio Kanai 
    Class Format
    Face-to-face
    Class Style
    *Please click here for more information on the correspondence between 'Class Style' and ’Active Learning Methods’.
    Lab / On-site Training / Skill-Development, Group Work, Connecting to Other Sites
    Day of Week・Period
    Fri 5th
    Language
    Japanese
    Research Seminar Theme

    Analysis of functional RNAs and their regulatory proteins

    “Advanced Biosciences” seminars (Tomita, Naito, Kuroda, Kanai, Soga, Arakawa, Suzuki and Tsujimoto) are operated along with “Systems Biology Project” for graduate students. All members, including faculty members, graduate students, and undergraduate students are involved to research projects.
    At the first semester when you join the "Advanced Biosciences" seminars (Kenkyukai), you should take "SEMINAR B (1) Masaru Tomita."
    Please check our website for more details. http://www.iab.keio.ac.jp/en



    Research activities & projects of the RNA group:
    (1) RNA-binding proteins & RNA-related enzymes
    (2) Non-coding RNAs (microRNA & small RNA)
    (3) tRNA & rRNA
    (4) Post-transcriptional RNA processing
    (5) Developmental regulation of gene expression
    (6) Artificial small RNA
    (7) Molecular evolution
    (8) Origin of life

  • SEMINAR B (2)

    Faculty/Graduate School
    POLICY MANAGEMENT / ENVIRONMENT AND INFORMATION STUDIES
    Course Registration Number
    04200
    Subject Sort
    A1102
    Field
    Research Seminars
    Unit
    2 Unit
    K-Number
    FPE-CO-05003-311-43
    Year/Semester
    2022 Fall
    Lecturer Name
    Masaru Tomita 
    Class Format
    Face-to-face
    Class Style
    *Please click here for more information on the correspondence between 'Class Style' and ’Active Learning Methods’.
    Lab / On-site Training / Skill-Development, Group Work, Connecting to Other Sites
    Day of Week・Period
    Fri 5th
    Language
    Japanese
    Research Seminar Theme

    Introduction to Systems Biology

    “Advanced Biosciences” seminars (Tomita, Naito, Kuroda, Kanai, Soga, Arakawa, Tsujimoto and Hirayama) are operated along with “Systems Biology Project” for graduate students. All members, including faculty members, graduate students, and undergraduate students are involved to research projects.
    At the first semester when you join the "Advanced Biosciences" seminars (Kenkyukai), you should take "SEMINAR B (1) Masaru Tomita."
    Please check our website for more details. http://www.iab.keio.ac.jp/en

  • SEMINAR B (1)

    Faculty/Graduate School
    POLICY MANAGEMENT / ENVIRONMENT AND INFORMATION STUDIES
    Course Registration Number
    05282
    Subject Sort
    A1102
    Field
    Research Seminars
    Unit
    2 Unit
    K-Number
    FPE-CO-05003-311-43
    Year/Semester
    2022 Fall
    Lecturer Name
    Masaru Tomita 
    Class Format
    Face-to-face
    Class Style
    *Please click here for more information on the correspondence between 'Class Style' and ’Active Learning Methods’.
    Lab / On-site Training / Skill-Development, Group Work, Connecting to Other Sites
    Day of Week・Period
    Tue 5th
    Language
    Japanese
    Research Seminar Theme

    Introduction to Systems Biology

    “Advanced Biosciences” seminars (Tomita, Naito, Kuroda, Kanai, Soga, Arakawa, Tsujimoto and Hirayama) are operated along with “Systems Biology Project” for graduate students. All members, including faculty members, graduate students, and undergraduate students are involved to research projects.
    At the first semester when you join the "Advanced Biosciences" seminars (Kenkyukai), you should take "SEMINAR B (1) Masaru Tomita."
    Please check our website for more details. http://www.iab.keio.ac.jp/en

  • SEMINAR B (2)

    Faculty/Graduate School
    POLICY MANAGEMENT / ENVIRONMENT AND INFORMATION STUDIES
    Course Registration Number
    05297
    Subject Sort
    A1102
    Field
    Research Seminars
    Unit
    2 Unit
    K-Number
    FPE-CO-05003-311-43
    Year/Semester
    2022 Spring
    Lecturer Name
    Masaru Tomita 
    Class Format
    Face-to-face
    Class Style
    *Please click here for more information on the correspondence between 'Class Style' and ’Active Learning Methods’.
    Seminar, Lab / On-site Training / Skill-Development, Group Work, Connecting to Other Sites
    Day of Week・Period
    Fri 5th
    Language
    Japanese
    Research Seminar Theme

    Systems Biology in Medical, Environmental and Food Sciences

    “Advanced Biosciences” seminars (Tomita, Naito, Kuroda, Kanai, Soga, Arakawa, Suzuki and Tsujimoto) are operated along with “Systems Biology Project” for graduate students. All members, including faculty members, graduate students, and undergraduate students are involved to research projects.
    At the first semester when you join the "Advanced Biosciences" seminars (Kenkyukai), you should take "SEMINAR B (1) Masaru Tomita."
    Please check our website for more details. http://www.iab.keio.ac.jp/en

Conditions

Year