Syllabus

SubjectGENOME ENGINEERING LABORATORY (TTCK)

Class Information

Faculty/Graduate School
MEDIA AND GOVERNANCE
Course Registration Number
19247
Subject Sort
60820
Title
GENOME ENGINEERING LABORATORY
Field
Program Courses
Unit
2 Unit
Year/Semester
2021 Fall
K-Number
Faculty/Graduate School
MEDIA AND GOVERNANCE
Course Registration Number
19247
Subject Sort
60820
Title
GENOME ENGINEERING LABORATORY
Field
Program Courses
Unit
2 Unit
Year/Semester
2021 Fall
K-Number
Year/Semester
2021 Fall
Day of Week・Period
Lecturer Name
Kazuharu Arakawa
Class Format
Face-to-face
Language
Japanese
Location
TTCK
Class Style
*Please click here for more information on the correspondence between 'Class Style' and ’Active Learning Methods’.
Seminar
GIGA Certificate
Not applied

Detail

Course Summary

In light of the advent of DNA sequencing technologies, genomic analysis of microbes is “democratized” to the level where “anyone” can sequence “anywhere”. Portable nanopore sequencing device that enables extreme long reads without the need for large initial investment especially contributed to this accessibility. Therefore, it is now economically feasible to sequence the entire genome instead of a single amplified gene to answer certain questions. In this workshop, we train students to go through the entire process of 1. Long DNA extraction and purification, 2. Nanopore sequencing, 3. Bioinformatics of genome assembly and annotation, and 4. Writing Genome Report paper for submission to international archives.